spacer
spacer

PDBsum entry 2xau

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2xau calculated with MOLE 2.0 PDB id
2xau
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
20 pores, coloured by radius 25 pores, coloured by radius 25 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.68 2.29 30.7 -1.00 -0.48 14.2 82 3 3 3 3 1 2 0  GOL 1752 B
2 2.45 2.61 35.9 -1.27 -0.35 18.5 84 5 3 4 3 0 3 0  GOL 1752 B
3 1.49 2.28 39.4 -1.56 -0.40 21.8 87 4 2 4 5 1 1 0  ACT 1751 B
4 1.46 2.27 41.4 -1.25 -0.31 19.1 84 6 3 4 3 1 1 0  ACT 1751 B GOL 1752 B
5 1.37 1.44 43.3 -2.32 -0.56 23.9 81 6 6 4 1 1 1 0  GOL 1752 B
6 2.28 2.47 43.5 -1.49 -0.35 19.1 82 6 3 4 3 1 3 0  GOL 1754 A
7 2.34 2.34 50.3 -2.23 -0.25 28.1 79 10 6 4 3 1 4 0  
8 1.68 2.29 54.2 -0.81 -0.40 12.8 84 4 3 6 6 1 4 0  GOL 1752 B
9 2.51 2.51 54.8 -2.27 -0.38 34.6 78 11 10 0 4 1 1 0  
10 1.35 1.46 55.3 -2.02 -0.52 22.4 82 6 5 5 4 1 2 0  
11 2.36 2.37 57.9 -2.48 -0.35 35.1 77 11 9 1 4 3 1 0  
12 2.05 2.93 59.7 -1.43 -0.23 14.3 74 2 4 2 2 2 3 0  
13 1.50 2.24 60.2 -1.11 -0.42 16.9 83 5 5 5 6 2 1 0  GOL 1752 B
14 2.33 2.33 61.1 -2.15 -0.20 28.1 79 10 6 6 4 2 4 0  
15 2.04 2.93 61.8 -1.40 -0.40 12.5 81 6 3 5 3 2 4 0  
16 1.48 2.29 62.6 -1.60 -0.37 22.1 83 6 6 6 5 1 2 0  GOL 1754 A
17 1.48 2.35 67.2 -1.55 -0.36 18.4 84 6 3 7 6 2 3 0  
18 1.31 1.33 89.4 -2.46 -0.49 25.7 82 8 10 8 3 3 2 0  GOL 1754 A
19 1.59 1.61 91.5 -2.25 -0.41 26.4 82 14 7 6 4 2 5 0  
20 1.58 1.62 94.3 -2.18 -0.49 27.0 84 15 9 3 4 0 3 0  
21 1.26 1.41 123.4 -2.20 -0.45 21.9 80 8 6 7 4 4 3 0  NI 1752 A
22 1.31 2.39 138.6 -1.85 -0.32 18.6 80 8 9 10 7 5 6 0  
23 1.22 1.48 155.8 -2.16 -0.33 23.8 80 9 8 6 5 4 4 0  NI 1752 A
24 1.22 1.35 214.5 -2.14 -0.37 25.6 77 10 9 3 3 3 4 0  NI 1752 A
25 1.31 2.40 231.1 -1.88 -0.28 22.0 77 10 12 6 5 4 7 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer