spacer
spacer

PDBsum entry 2x9e

Go to PDB code: 
Top Page protein ligands tunnels links
Tunnel analysis for: 2x9e calculated with MOLE 2.0 PDB id
2x9e
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.19 26.0 -1.38 -0.31 20.8 74 2 3 1 4 2 0 0  SVE 1796 A
2 1.27 1.31 17.0 1.31 0.64 11.3 69 1 1 0 5 1 2 1  
3 1.28 1.35 17.5 0.84 0.31 10.5 75 2 1 1 5 1 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer