spacer
spacer

PDBsum entry 2x4f

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2x4f calculated with MOLE 2.0 PDB id
2x4f
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.88 1.88 16.0 -0.16 -0.51 6.9 83 0 2 1 2 1 0 0  
2 1.66 1.87 17.0 -0.16 -0.39 10.1 80 0 2 1 3 0 0 0  
3 1.88 1.88 22.1 -0.38 -0.57 7.4 89 0 1 2 3 0 0 0  
4 1.30 1.30 22.7 -0.71 -0.46 8.8 75 1 2 1 3 2 1 0  
5 1.23 1.23 22.9 -0.83 -0.49 9.0 75 1 2 1 3 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer