 |
PDBsum entry 2x1w
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 2x1w calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2x1w
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
10 tunnels,
coloured by tunnel radius |
|
9 tunnels,
coloured by
tunnel radius
|
9 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.30 |
1.47 |
21.9 |
-1.19 |
-0.50 |
13.9 |
76 |
|
2 |
2 |
2 |
2 |
1 |
1 |
1 |
|
|
 |
|
2 |
 |
1.30 |
1.46 |
29.2 |
-1.35 |
-0.35 |
20.4 |
81 |
3 |
3 |
1 |
3 |
1 |
1 |
0 |
|
|
3 |
 |
1.18 |
1.56 |
37.0 |
0.87 |
0.22 |
6.6 |
78 |
1 |
0 |
2 |
7 |
3 |
1 |
0 |
|
|
4 |
 |
1.29 |
1.30 |
30.4 |
-1.61 |
-0.48 |
17.3 |
75 |
2 |
2 |
3 |
1 |
2 |
1 |
0 |
|
|
5 |
 |
1.29 |
1.30 |
32.8 |
-1.69 |
-0.46 |
19.3 |
77 |
3 |
3 |
2 |
1 |
2 |
1 |
0 |
CS 1215 B
|
|
6 |
 |
1.11 |
1.13 |
34.7 |
-1.24 |
-0.39 |
16.3 |
75 |
3 |
3 |
4 |
2 |
2 |
1 |
2 |
|
|
7 |
 |
1.09 |
1.24 |
33.8 |
0.76 |
0.25 |
9.2 |
77 |
1 |
0 |
1 |
8 |
3 |
0 |
0 |
|
|
8 |
 |
1.21 |
1.21 |
15.7 |
-0.06 |
0.26 |
14.0 |
79 |
2 |
1 |
1 |
4 |
1 |
0 |
0 |
|
 |
9 |
 |
1.22 |
1.22 |
23.6 |
0.98 |
0.65 |
11.2 |
78 |
2 |
1 |
0 |
5 |
2 |
1 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program