PDBsum entry 2wtf

Pore analysis for: 2wtf calculated with

MOLE 2.0

PDB id

2wtf

Pores calculated on whole structure

Pores calculated excluding ligands

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13 pores, coloured by radius

11 pores, coloured by radius

11 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.40

2.28

31.3

-1.10

-0.44

17.3

81

3

2

3

3

2

0

0

DC 3 S DT 4 S DC 5 S

2

1.67

1.67

32.9

-1.69

-0.35

23.4

86

2

2

3

2

1

0

0

CA 1509 B DTP 1511 B DT -
1 S DG 0 S DG 2 S DC 3 S DC 9 T

3

1.87

1.87

36.5

-0.68

-0.31

16.4

91

2

4

4

5

1

1

0

4

1.41

2.29

45.1

-1.26

-0.37

20.2

82

3

4

5

4

3

0

0

CA 1509 B DTP 1511 B DT -1 S DT 4 S DC 5 S DC 9 T

5

1.95

3.41

48.3

-1.15

-0.11

20.5

88

5

1

2

3

1

0

0

DC 3 S DT 4 S DC 7 S DT 2 T DG 3 T DG 4 T DT 5 T

6

1.20

2.22

61.1

-0.08

-0.17

8.8

78

4

2

3

6

2

1

0

DT -1 S DC 8 S DA 7 T DG 8 T

7

2.29

2.29

65.8

-0.87

-0.47

6.7

83

2

1

6

2

3

2

0

DT -1 S DA 7 T DG 8 T

8

1.17

2.24

76.5

0.00

-0.04

9.8

81

4

3

5

8

3

2

0

DC 8 S DA 7 T

9

1.37

1.44

80.0

-1.85

-0.52

20.6

82

7

4

6

3

2

3

0

DC 5 O DG 8 P DC 9 P

10

1.40

1.40

84.0

-1.51

-0.39

23.4

83

7

8

4

7

2

2

0

DC 5 O DG 8 P DC 9 P

11

1.40

1.39

94.3

-1.41

-0.49

15.7

84

7

2

3

3

1

1

0

DC -2 O DT -
1 O DC 5 O DA 6 O DC 7 O DC 8 O DA 9 O DG 6 P DA
7 P DG 8 P DC 9 P

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.