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PDBsum entry 2wom

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2wom calculated with MOLE 2.0 PDB id
2wom
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.98 2.02 25.2 -1.34 -0.46 19.2 79 4 1 1 2 0 0 1  
2 1.65 2.83 39.6 -2.19 -0.57 28.3 81 6 5 2 2 0 2 0  
3 1.33 1.70 40.0 -0.17 0.06 13.8 73 2 3 1 4 3 3 0  ZZE 1558 A
4 1.32 1.66 45.9 0.10 0.46 12.2 73 3 4 1 6 4 1 0  ZZE 1558 A
5 1.15 2.54 88.0 -1.80 -0.36 16.1 84 7 2 7 3 2 0 0  
6 1.37 2.46 106.6 -1.40 -0.33 18.2 76 14 5 5 4 3 4 1  
7 1.29 1.58 115.0 -1.79 -0.47 20.1 76 15 8 7 2 3 4 1  
8 1.40 3.67 152.3 -1.56 -0.28 17.2 81 12 5 10 8 4 4 0  
9 1.29 1.57 160.7 -1.86 -0.40 18.7 80 13 8 12 6 4 4 0  
10 1.33 1.59 171.3 -1.40 -0.28 17.4 76 12 8 5 6 4 7 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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