PDBsum entry 2wii

Pore analysis for: 2wii calculated with

MOLE 2.0

PDB id

2wii

Pores calculated on whole structure

Pores calculated excluding ligands

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14 pores, coloured by radius

12 pores, coloured by radius

12 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.97

2.24

25.3

-1.14

0.00

16.5

79

4

2

2

3

2

1

0

2

2.61

2.87

26.3

-0.89

-0.44

17.3

92

3

3

3

6

0

0

0

3

1.19

1.19

26.8

-1.44

-0.51

18.4

87

5

3

5

5

0

0

0

4

1.80

3.52

27.7

-2.18

-0.39

30.6

81

6

6

2

1

1

1

0

5

1.48

1.48

33.8

-0.91

-0.45

16.3

78

3

2

3

3

1

3

0

GOL 2647 B

6

2.18

2.22

34.6

-1.34

-0.71

10.2

83

2

2

3

1

0

1

0

7

1.68

1.68

38.7

-0.86

-0.39

10.3

85

2

1

3

2

1

2

0

8

1.53

1.53

43.6

-1.08

-0.19

22.1

81

8

6

3

6

1

1

0

9

2.09

2.25

43.6

-1.52

-0.30

21.9

77

4

5

5

4

2

2

0

10

2.47

2.68

70.5

-1.60

-0.65

16.8

82

7

3

4

2

2

1

0

11

2.10

2.27

71.2

-1.67

-0.42

18.9

77

5

5

7

4

2

2

1

12

2.61

2.87

95.1

-1.47

-0.53

18.2

82

8

7

7

6

2

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.