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PDBsum entry 2wd3

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Cleft analysis for: 2wd3 PDB id
2wd3
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1883.67 1.96 59.20 7 10.88 1 13.42 1 7 5 4 2 4 8 0  
2 961.45 0.00 73.71 1 9.75 2 7.86 5 3 3 7 11 5 2 0 MS4 1261[A], MS4 1262[A] (33 atoms)
3 842.48 0.00 59.13 9 7.77 5 7.79 7 3 2 3 5 1 5 0  
4 815.06 0.00 62.74 6 8.08 4 6.55 9 5 2 5 5 1 2 0  
5 677.95 0.00 59.20 8 5.18 9 8.08 4 5 0 2 3 5 1 0  
6 526.08 0.00 54.99 10 5.24 8 8.26 3 2 2 2 3 0 5 0  
7 497.39 0.00 64.21 3 3.69 10 5.66 10 2 3 4 3 2 3 0  
8 405.42 0.00 73.35 2 6.94 6 7.82 6 4 1 2 2 1 3 0  
9 356.48 0.00 64.06 4 9.41 3 9.18 2 2 2 5 1 2 1 0  
10 337.92 0.00 64.04 5 6.82 7 7.20 8 1 2 1 3 2 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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