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PDBsum entry 2wbu

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protein dna_rna metals links
Transcription/DNA PDB id
2wbu

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
85 a.a. *
DNA/RNA
Metals
_ZN ×3
Waters ×21
* Residue conservation analysis
PDB id:
2wbu
Name: Transcription/DNA
Title: Crystal structure of the zinc finger domain of klf4 bound to its target DNA
Structure: Krueppel-like factor 4. Chain: a. Fragment: residues 396-483. Synonym: gut-enriched krueppel-like factor, epithelial zinc finger protein ezf. Engineered: yes. 5'-d( Dgp Dap Dgp Dgp Dcp Dgp Dtp Dgp Dgp Dc)-3'. Chain: b. Engineered: yes.
Source: Mus musculus. House mouse. Organism_taxid: 10090. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Synthetic: yes
Resolution:
2.50Å     R-factor:   0.220     R-free:   0.278
Authors: A.Schuetz,G.Zocher,D.Carstanjen,U.Heinemann
Key ref: A.Schuetz et al. (2011). The structure of the Klf4 DNA-binding domain links to self-renewal and macrophage differentiation. Cell Mol Life Sci, 68, 3121-3131. PubMed id: 21290164
Date:
05-Mar-09     Release date:   07-Apr-10    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q60793  (KLF4_MOUSE) -  Krueppel-like factor 4 from Mus musculus
Seq:
Struc:
483 a.a.
85 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

DNA/RNA chains
  G-A-G-G-C-G-T-G-G-C 10 bases
  G-C-C-A-C-G-C-C-T-C 10 bases

 

 
Cell Mol Life Sci 68:3121-3131 (2011)
PubMed id: 21290164  
 
 
The structure of the Klf4 DNA-binding domain links to self-renewal and macrophage differentiation.
A.Schuetz, D.Nana, C.Rose, G.Zocher, M.Milanovic, J.Koenigsmann, R.Blasig, U.Heinemann, D.Carstanjen.
 
  ABSTRACT  
 
No abstract given.

 

 

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