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PDBsum entry 2w9c
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Pore analysis for: 2w9c calculated with  MOLE 2.0
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PDB id
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2w9c
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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17 pores,
coloured by radius
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17 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.83 |
1.83 |
27.4 |
-1.97 |
-0.43 |
25.0 |
89 |
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5 |
1 |
2 |
2 |
0 |
0 |
0 |
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DG 5 C DT 9 E DC 10 E DC 11 E DT 12 E
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2 |
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3.72 |
3.76 |
28.6 |
-1.10 |
-0.68 |
13.5 |
91 |
1 |
2 |
1 |
3 |
0 |
0 |
0 |
TTP 1345 B DA 10 D DT 11 D DT 12 D DOC 13 D DC 4
F DG 6 F DT 9 F DC 10 F
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3 |
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3.51 |
3.61 |
29.8 |
-1.92 |
-0.54 |
20.4 |
82 |
4 |
2 |
1 |
1 |
1 |
0 |
0 |
MG 1342 A TTP 1345 A DG 5 C DT 12 C DOC 13 C DC 4
E DG 6 E DC 10 E DC 11 E DT 12 E
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4 |
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3.16 |
3.16 |
31.4 |
-1.02 |
-0.42 |
11.4 |
88 |
2 |
2 |
2 |
3 |
1 |
0 |
0 |
MG 1342 B TTP 1345 B DA 10 D DT 11 D DT 12 D DOC
13 D DC 4 F DG 6 F DA 7 F DA 8 F
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5 |
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3.30 |
3.81 |
35.5 |
-3.79 |
-0.49 |
46.0 |
75 |
6 |
4 |
0 |
0 |
1 |
0 |
0 |
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6 |
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1.87 |
1.94 |
39.9 |
-2.29 |
-0.48 |
28.7 |
81 |
9 |
6 |
1 |
2 |
1 |
0 |
0 |
MG 1342 A MG 1344 A TTP 1345 A DT 12 C DOC 13 C
O2G 5 E DG 6 E DA 7 E DA 3 F
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7 |
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2.00 |
2.07 |
42.2 |
-2.24 |
-0.57 |
26.6 |
88 |
5 |
5 |
5 |
3 |
1 |
0 |
0 |
MG 1342 A MG 1344 A TTP 1345 A DT 12 C DOC 13 C
DG 6 E DA 7 E DA 8 E
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8 |
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2.00 |
2.09 |
46.8 |
-1.62 |
-0.50 |
18.6 |
92 |
3 |
3 |
5 |
4 |
1 |
0 |
0 |
MG 1342 A TTP 1345 A DT 12 C DOC 13 C DC 4 E DG 6
E DA 7 E DA 8 E
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9 |
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1.61 |
1.65 |
48.0 |
-2.43 |
-0.52 |
32.2 |
79 |
9 |
6 |
1 |
2 |
2 |
0 |
0 |
MG 1344 B TTP 1345 B DT 12 D DOC 13 D O2G 5 F DG
6 F DA 7 F
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10 |
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1.67 |
2.45 |
50.5 |
-3.43 |
-0.49 |
35.8 |
77 |
6 |
5 |
3 |
0 |
2 |
1 |
0 |
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11 |
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1.87 |
1.98 |
53.4 |
-2.67 |
-0.49 |
32.7 |
79 |
10 |
8 |
1 |
2 |
1 |
1 |
0 |
MG 1342 A MG 1344 A TTP 1345 A DT 12 C DOC 13 C
O2G 5 E DG 6 E DA 7 E
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12 |
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2.08 |
2.26 |
53.9 |
-2.04 |
-0.64 |
23.9 |
80 |
6 |
3 |
2 |
1 |
1 |
0 |
0 |
DT 12 D DOC 13 D DA 7 F DA 8 F DT 9 F DC 10 F
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13 |
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1.64 |
1.67 |
55.6 |
-2.04 |
-0.52 |
26.2 |
83 |
7 |
4 |
1 |
3 |
1 |
0 |
0 |
TTP 1345 B DA 10 D DT 11 D DT 12 D DOC 13 D DC 4
F O2G 5 F DG 6 F DA 7 F
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14 |
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1.86 |
1.93 |
57.8 |
-2.36 |
-0.42 |
28.3 |
80 |
8 |
6 |
1 |
2 |
1 |
1 |
0 |
MG 1342 A TTP 1345 A DT 12 C DOC 13 C DC 4 E O2G
5 E DG 6 E DA 7 E
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15 |
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1.86 |
1.97 |
60.5 |
-2.26 |
-0.44 |
27.6 |
75 |
10 |
5 |
1 |
1 |
4 |
0 |
0 |
DG 5 C DT 12 C DOC 13 C DG 6 E DA 7 E DA 8 E DC
10 E DC 11 E DT 12 E
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16 |
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1.87 |
1.94 |
60.6 |
-2.43 |
-0.46 |
29.6 |
76 |
11 |
7 |
1 |
1 |
2 |
1 |
0 |
DG 5 C DT 12 C DOC 13 C DG 6 E DA 7 E DA 8 E DC
10 E DC 11 E DT 12 E
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17 |
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1.87 |
1.93 |
63.7 |
-2.09 |
-0.39 |
25.6 |
81 |
8 |
4 |
1 |
3 |
2 |
0 |
0 |
MG 1342 A TTP 1345 A DT 12 C DOC 13 C DC 4 E O2G
5 E DG 6 E DA 7 E
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program