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PDBsum entry 2w6f

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 2w6f calculated with MOLE 2.0 PDB id
2w6f
Pores calculated on whole structure Pores calculated excluding ligands

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23 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.14 4.00 35.3 -1.53 -0.44 14.7 79 2 2 3 2 0 1 0  
2 1.43 2.30 37.5 -1.28 -0.27 22.6 80 4 3 2 4 2 0 0  
3 2.02 4.25 47.4 -1.31 -0.28 25.8 86 5 6 4 7 1 0 0  
4 1.38 1.44 49.5 -1.66 -0.54 12.3 90 3 2 9 3 2 1 0  
5 1.17 1.53 55.6 -2.03 -0.64 24.3 82 5 7 4 5 0 0 0  
6 1.35 3.28 57.4 -0.84 -0.20 16.5 78 3 8 2 9 3 1 0  
7 1.25 1.25 62.8 -0.80 -0.35 12.4 80 4 4 1 8 1 6 0  
8 1.19 1.71 70.2 -1.64 -0.30 25.0 82 7 7 2 4 1 1 0  
9 1.66 3.47 77.6 -1.78 -0.52 18.9 84 6 6 6 5 0 0 0  
10 1.21 1.74 84.4 -1.54 -0.35 22.1 76 8 6 0 6 3 1 0  
11 1.44 1.59 86.1 -1.56 -0.39 23.4 83 7 10 6 10 0 1 0  
12 1.19 1.72 93.4 -1.15 -0.34 18.1 79 7 10 4 11 1 2 0  
13 1.44 1.50 106.2 -1.00 -0.35 16.7 85 8 9 6 14 0 4 0  
14 1.38 1.38 123.1 -1.07 -0.35 19.9 83 11 13 3 16 1 4 0  
15 1.45 1.46 123.6 -0.85 -0.28 19.9 82 9 13 2 19 3 3 0  
16 1.43 1.55 128.7 -1.37 -0.41 19.8 84 10 10 6 13 2 3 0  
17 1.35 1.38 138.5 -1.35 -0.33 18.1 82 14 10 8 12 5 3 0  
18 1.39 1.44 147.1 -1.29 -0.47 15.9 86 9 13 9 14 2 3 0  
19 1.35 1.37 149.8 -1.41 -0.41 19.8 84 13 11 6 13 1 4 0  
20 1.26 2.09 157.9 -0.99 -0.34 20.0 82 13 15 7 19 2 2 0  
21 1.39 1.38 164.0 -1.30 -0.45 18.4 85 13 18 6 16 3 3 0  
22 1.26 2.08 166.9 -0.91 -0.37 18.3 85 11 16 6 19 2 4 0  
23 1.08 1.86 198.9 -0.98 -0.39 19.8 84 15 21 4 21 3 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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