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PDBsum entry 2w4u

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 2w4u calculated with MOLE 2.0 PDB id
2w4u
Pores calculated on whole structure Pores calculated excluding ligands

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32 pores, coloured by radius 32 pores, coloured by radius 32 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.45 1.63 42.7 -0.90 -0.19 14.1 81 3 5 2 4 3 0 0  
2 1.39 1.38 48.0 -1.18 -0.25 15.4 80 2 4 4 3 3 1 0  
3 1.57 2.69 70.1 -2.46 -0.61 30.0 80 7 9 4 3 3 1 0  
4 1.48 1.46 72.7 -1.63 -0.40 20.1 79 6 9 4 3 3 2 0  
5 1.40 1.55 75.3 -1.45 -0.31 16.8 82 6 3 6 4 4 2 0  
6 1.85 4.04 96.2 -1.70 -0.14 22.3 77 10 10 4 12 4 4 0  
7 2.08 2.18 98.0 -1.45 -0.41 21.3 87 10 11 4 15 2 0 0  
8 1.44 1.63 112.8 -1.55 -0.34 19.6 83 11 8 5 11 6 1 0  
9 2.45 4.71 114.0 -1.75 -0.35 22.2 83 13 12 6 15 5 1 0  
10 1.48 1.65 122.0 -1.27 -0.21 16.8 81 10 4 6 7 5 3 0  
11 1.43 1.63 125.4 -1.11 -0.16 15.8 81 11 3 4 9 6 2 0  
12 1.49 1.63 126.8 -1.42 -0.21 16.7 78 10 5 8 9 6 4 0  
13 2.07 4.98 135.0 -2.04 -0.27 26.3 78 14 15 5 14 5 3 0  
14 2.50 5.18 137.4 -2.07 -0.26 26.1 76 15 15 4 14 6 4 0  
15 1.41 1.82 147.0 -1.66 -0.27 18.4 80 12 8 9 10 6 4 0  
16 1.50 1.64 153.7 -1.45 -0.34 19.4 85 15 11 8 18 7 1 0  
17 2.16 5.26 160.8 -1.96 -0.31 25.3 80 18 17 7 15 6 3 0  
18 1.52 1.74 165.3 -1.21 -0.27 14.3 80 12 5 9 10 8 4 0  
19 1.60 1.82 177.3 -1.80 -0.42 23.1 82 17 16 9 9 5 4 0  
20 1.58 1.62 184.4 -2.05 -0.41 26.3 81 19 17 8 10 4 3 0  
21 1.37 1.37 186.9 -1.71 -0.40 20.9 84 18 15 11 17 6 3 0  
22 1.44 1.64 193.9 -1.63 -0.26 20.6 81 19 12 8 17 8 3 0  
23 1.17 1.49 210.1 -1.00 -0.13 18.0 80 17 9 8 16 7 3 0  
24 1.42 1.62 202.8 -1.33 -0.31 16.4 82 16 9 11 16 9 4 0  
25 1.19 1.51 217.0 -1.26 -0.14 20.9 79 19 11 7 17 6 2 0  
26 1.62 2.02 374.5 -1.64 -0.40 21.5 86 38 35 21 45 11 3 0  
27 1.40 1.64 390.4 -1.44 -0.36 19.4 85 36 29 21 40 14 4 0  
28 1.49 1.73 413.3 -1.58 -0.35 21.3 85 42 36 20 51 15 4 0  
29 2.61 3.56 438.0 -1.67 -0.39 22.7 86 48 46 23 63 14 2 0  
30 1.58 1.76 453.9 -1.54 -0.38 21.1 86 43 41 25 57 15 3 0  
31 2.75 4.59 39.8 -2.81 -0.73 33.6 79 5 7 2 2 0 1 0  
32 1.34 1.58 46.2 -3.09 -0.62 36.4 78 9 6 2 0 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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