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PDBsum entry 2w4k

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Transferase PDB id
2w4k
Contents
Protein chain
301 a.a.
Ligands
ADP
Metals
_MG
Waters ×271

References listed in PDB file
Key reference
Title A pef/y substrate recognition and signature motif plays a critical role in dapk-Related kinase activity.
Authors K.Temmerman, I.De diego, V.Pogenberg, B.Simon, W.Jonko, X.Li, M.Wilmanns.
Ref. Chem Biol, 2014, 21, 264-273. [DOI no: 10.1016/j.chembiol.2013.12.008]
PubMed id 24440081
Abstract
Knowledge about protein kinase substrate preferences is biased toward residues immediately adjacent to the site of phosphorylation. By a combined structural, biochemical, and cellular approach, we have discovered an unexpected substrate recognition element with the consensus sequence PEF/Y in the tumor suppressor death-associated protein kinase 1. This motif can be effectively blocked by a specific pseudosubstrate-type interaction with an autoregulatory domain of this kinase. In this arrangement, the central PEF/Y glutamate interacts with a conserved arginine distant to the phosphorylation site in sequence and structure. We also demonstrate that the element is crucial for kinase activity regulation and substrate recognition. The PEF/Y motif distinguishes close death-associated protein kinase relatives from canonical calcium/calmodulin-dependent protein kinases. Insight into this signature and mode of action offers new opportunities to identify specific small molecule inhibitors in PEF/Y-containing protein kinases.
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