 |
PDBsum entry 2w2c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2w2c calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2w2c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
11 pores,
coloured by radius |
|
11 pores,
coloured by radius
|
11 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.54 |
1.56 |
61.3 |
-0.48 |
-0.25 |
8.4 |
82 |
|
3 |
2 |
5 |
7 |
1 |
2 |
0 |
|
|
 |
|
2 |
 |
1.50 |
1.50 |
65.0 |
-0.84 |
-0.45 |
5.0 |
78 |
1 |
1 |
7 |
6 |
1 |
1 |
0 |
|
|
3 |
 |
1.49 |
1.49 |
65.3 |
-0.35 |
-0.07 |
10.6 |
79 |
3 |
2 |
2 |
6 |
2 |
2 |
0 |
|
|
4 |
 |
1.64 |
1.64 |
73.4 |
-0.81 |
-0.33 |
11.1 |
83 |
4 |
4 |
6 |
8 |
1 |
2 |
0 |
|
|
5 |
 |
1.59 |
1.60 |
77.8 |
-0.39 |
-0.11 |
7.0 |
83 |
3 |
1 |
7 |
9 |
2 |
1 |
0 |
|
|
6 |
 |
1.50 |
1.50 |
81.8 |
-0.93 |
-0.41 |
8.0 |
80 |
2 |
4 |
7 |
7 |
1 |
1 |
0 |
|
|
7 |
 |
1.50 |
1.50 |
81.5 |
-0.12 |
-0.12 |
8.0 |
73 |
3 |
2 |
3 |
8 |
2 |
3 |
0 |
|
|
8 |
 |
1.56 |
1.57 |
94.6 |
-0.60 |
-0.19 |
10.2 |
84 |
5 |
4 |
7 |
10 |
2 |
1 |
0 |
|
|
9 |
 |
2.85 |
2.85 |
94.3 |
0.21 |
0.19 |
9.8 |
79 |
5 |
2 |
3 |
11 |
3 |
3 |
0 |
|
|
10 |
 |
1.60 |
1.60 |
31.9 |
-1.27 |
-0.49 |
8.8 |
90 |
1 |
3 |
5 |
3 |
0 |
0 |
0 |
|
 |
11 |
 |
1.57 |
1.62 |
78.3 |
-0.82 |
-0.21 |
7.7 |
83 |
4 |
2 |
8 |
8 |
1 |
2 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program