spacer
spacer

PDBsum entry 2w17

Go to PDB code: 
Top Page protein ligands tunnels links
Tunnel analysis for: 2w17 calculated with MOLE 2.0 PDB id
2w17
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.61 1.61 16.6 0.07 -0.19 6.7 72 2 0 1 3 1 0 0  
2 1.72 1.95 23.0 1.25 0.60 7.9 71 2 0 0 7 3 1 0  
3 1.58 1.59 24.1 1.05 0.19 7.1 79 1 1 2 6 2 0 0  I19 1300 A
4 1.58 1.59 28.6 1.54 0.41 6.2 78 2 2 0 7 2 0 0  I19 1300 A
5 1.28 1.46 34.2 2.71 0.95 4.2 80 2 0 1 10 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer