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PDBsum entry 2vz8

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 2vz8 calculated with MOLE 2.0 PDB id
2vz8
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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31 tunnels, coloured by tunnel radius 31 tunnels, coloured by tunnel radius 31 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.48 12.0 0.19 0.62 9.6 70 1 1 1 3 1 1 0  
2 1.37 33.3 -0.96 0.01 16.2 77 2 2 2 4 1 1 0  
3 1.32 14.0 1.64 0.71 10.5 72 1 1 1 4 1 0 1  
4 1.47 10.9 -1.27 0.27 13.0 83 2 0 2 2 1 0 0  
5 1.46 16.3 -1.83 -0.40 18.2 80 3 0 2 2 1 1 0  
6 1.45 11.2 0.33 -0.16 5.4 76 0 1 2 4 1 0 0  
7 1.44 11.3 0.85 -0.12 2.2 78 0 0 1 4 0 1 0  
8 1.64 16.6 1.24 0.39 5.5 84 1 0 2 8 0 1 0  
9 1.31 9.2 2.30 0.91 0.7 83 0 0 0 5 1 0 0  
10 1.27 14.6 0.56 0.18 1.4 85 0 0 0 2 1 1 0  
11 1.32 20.6 -0.47 -0.27 6.5 73 2 0 1 5 1 1 1  
12 2.39 5.0 -0.90 -0.19 9.2 73 2 0 1 1 2 0 0  
13 2.32 6.2 -0.88 -0.33 6.5 72 1 0 2 1 2 1 0  
14 1.30 18.8 -0.20 -0.13 6.0 76 2 0 1 5 1 1 0  
15 1.50 15.0 2.11 0.70 5.7 74 1 0 1 5 1 0 1  
16 2.35 4.9 -0.88 -0.19 9.6 73 2 0 1 1 2 0 0  
17 2.38 6.1 -0.88 -0.33 6.5 72 1 0 2 1 2 1 0  
18 1.51 13.2 1.42 0.79 1.3 56 0 0 0 2 2 1 1  
19 2.03 5.2 -0.31 -0.40 2.5 73 0 0 0 1 0 2 1  
20 1.65 5.2 -1.70 -0.57 14.2 64 0 1 0 0 0 2 0  
21 1.30 11.4 -0.88 -0.23 12.8 73 1 1 1 2 1 1 0  
22 1.30 8.6 1.58 0.29 1.7 77 0 0 1 3 1 0 0  
23 1.37 10.1 2.09 0.47 1.4 77 0 0 1 3 1 0 0  
24 1.47 14.0 -1.70 0.28 15.2 84 3 0 2 2 1 0 0  
25 1.53 7.4 -2.11 -0.72 21.1 88 1 1 2 2 0 0 0  
26 1.59 8.9 -1.72 -0.68 16.2 87 1 1 2 2 0 0 0  
27 1.67 6.7 1.84 0.31 4.2 82 1 1 1 4 0 0 0  
28 1.42 9.0 -0.64 -0.48 8.0 77 0 1 2 2 0 0 0  
29 2.55 3.8 -2.08 -0.43 21.7 79 1 1 0 1 0 1 0  
30 1.71 7.9 -1.58 -0.81 11.8 71 0 1 1 2 0 0 0  
31 1.25 5.5 -3.36 -0.88 44.5 82 1 2 0 0 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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