PDBsum entry 2vye Go to PDB code:  Pore analysis for: 2vye calculated with MOLE 2.0 PDB id 2vye Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 1.44 40.3 -1.32 -0.30 22.6 84 2 4 4 3 2 2 0   2 1.50 1.56 52.6 -2.31 -0.50 30.3 88 10 6 8 4 1 3 0  DT 2008 C 3 1.17 2.25 61.0 0.32 0.04 15.2 81 6 6 4 19 2 2 1  DT 2008 C 4 1.23 1.30 70.7 -2.46 -0.48 36.2 76 9 6 1 5 1 0 0   5 1.34 1.39 72.3 -2.00 -0.35 29.6 78 6 4 3 5 0 0 0  DT 2005 C DT 2006 C DT 2007 C 6 1.14 2.20 79.6 0.02 0.06 13.9 75 5 4 5 13 4 3 1   7 1.22 1.28 89.1 -2.85 -0.55 34.7 77 9 5 4 4 1 0 0  DT 2005 C DT 2006 C DT 2007 C 8 1.29 1.90 148.5 -2.19 -0.59 21.4 85 13 13 15 6 1 3 0  DT 2009 C 9 1.55 2.59 177.4 -1.66 -0.50 19.5 84 8 12 8 9 2 3 0  DT 2007 C 10 1.42 1.84 182.4 -0.86 -0.31 16.4 84 10 10 9 18 1 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.