spacer
spacer

PDBsum entry 2vvz

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2vvz calculated with MOLE 2.0 PDB id
2vvz
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
11 tunnels, coloured by tunnel radius 11 tunnels, coloured by tunnel radius 11 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.25 32.0 -1.89 -0.31 19.3 82 6 2 4 2 2 0 0  
2 1.31 34.2 -1.52 -0.45 13.3 80 3 2 5 1 2 1 0  
3 1.31 34.2 -1.59 -0.48 13.9 80 3 2 5 1 2 1 0  
4 1.70 15.6 -2.25 -0.40 20.7 73 1 3 2 2 3 0 0  
5 1.25 27.0 -0.26 -0.44 5.5 96 3 1 4 3 0 0 0  
6 1.26 29.3 -0.35 -0.50 4.8 94 1 2 4 3 0 1 0  
7 1.48 10.2 -0.70 -0.31 10.9 76 3 0 1 1 1 1 0  1793 CL A
8 1.30 9.3 -2.40 -0.68 33.3 76 2 1 0 1 0 0 0  
9 1.29 9.6 -1.90 -0.76 23.9 85 1 1 1 2 0 0 0  
10 1.54 9.3 -0.43 -0.32 8.0 80 3 0 1 0 1 1 0  
11 1.50 9.4 -0.73 -0.26 5.6 79 2 0 1 0 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer