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PDBsum entry 2vvz

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Top Page protein ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 2vvz PDB id
2vvz
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 13884.75 2.11 69.92 3 14.87 1 19.08 1 38 33 28 37 27 26 0  
2 6577.03 0.00 67.55 5 10.83 3 11.08 3 30 13 41 21 13 10 0 DAN 1792[A] (20 atoms)
3 2485.27 0.00 67.82 4 8.88 7 10.33 5 12 8 12 13 2 7 0  
4 2350.69 0.00 58.23 7 9.21 6 10.46 4 11 7 10 4 4 6 0  
5 1889.16 0.00 71.94 2 9.78 4 12.90 2 8 7 13 13 0 9 0  
6 1361.81 0.00 62.77 6 12.84 2 8.87 7 7 4 6 1 3 2 0  
7 1131.05 0.00 75.20 1 8.55 9 9.15 6 5 5 7 6 8 2 0 DAN 1792[B] (20 atoms)
8 1098.14 0.00 54.48 10 8.20 10 8.08 9 2 4 4 4 2 3 0  
9 963.14 0.00 56.89 8 9.42 5 7.71 10 2 4 3 4 2 3 0  
10 982.55 0.00 54.52 9 8.74 8 8.60 8 5 4 4 2 1 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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