PDBsum entry 2vum Go to PDB code:  Pore analysis for: 2vum calculated with MOLE 2.0 PDB id 2vum Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   23 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.34 2.64 42.0 -2.45 -0.66 29.6 90 4 6 4 1 0 0 0   2 1.70 3.18 79.4 -2.14 -0.53 23.1 80 9 3 4 1 2 2 0  DA 1 P DT 25 T DC 26 T DA 27 T DT 28 T 3 1.19 1.46 83.8 -0.98 -0.32 17.2 84 8 9 3 6 3 1 0   4 1.70 4.28 90.5 -1.31 -0.28 19.4 81 9 7 6 10 5 1 0   5 1.95 2.12 109.0 -2.21 -0.45 23.1 76 6 6 7 4 3 3 0   6 1.55 3.87 115.4 -1.96 -0.60 18.6 89 11 10 13 5 2 1 0   7 2.10 2.38 137.2 -1.68 -0.21 22.8 78 14 7 5 5 3 6 0   8 1.37 1.59 137.8 -1.11 -0.28 16.3 83 5 6 9 9 5 2 1   9 1.38 1.38 156.6 -1.96 -0.50 28.1 84 12 15 6 9 1 0 0   10 1.38 1.51 170.1 -1.89 -0.49 26.8 82 17 21 6 10 4 2 0   11 1.40 1.54 174.9 -1.94 -0.56 25.5 83 22 15 6 7 0 4 0  DA 2 N DA 1 P DC 5 P DC 6 P DA 7 P DA 17 T DC 18 T DG 19 T DC 21 T BRU 22 T DG 23 T DG 24 T DT 25 T 12 1.32 1.63 176.2 -1.42 -0.41 21.2 84 16 17 8 13 3 3 1  DA 9 T DA 10 T 13 1.78 2.05 184.8 -1.63 -0.46 22.4 83 16 18 16 12 7 2 0  CSX 8 M 14 1.15 1.42 183.8 -1.18 -0.34 17.5 84 13 7 7 9 3 3 1  DA 1 N DA 2 N DC 3 N DT 4 N DA 1 P DC 5 P DC 6 P DA 7 P DA 9 T DA 10 T DA 17 T DC 18 T DG 19 T DC 21 T BRU 22 T DG 23 T DG 24 T DT 25 T 15 1.36 1.51 199.7 -1.78 -0.49 24.2 84 18 19 16 10 2 4 0   16 2.32 2.32 202.1 -1.79 -0.46 23.4 81 21 13 6 9 4 4 0  DA 2 N DA 1 P DC 5 P DC 6 P DA 7 P DA 17 T DC 18 T DG 19 T DC 21 T BRU 22 T DG 23 T DG 24 T DT 25 T 17 2.24 2.33 204.5 -1.50 -0.31 19.2 85 19 13 20 11 8 3 0  CSX 8 M 18 1.27 2.08 209.6 -1.82 -0.44 22.4 83 23 13 10 11 4 4 0  DA 2 N DA 1 P DC 5 P DC 6 P DA 7 P DA 17 T DC 18 T DG 19 T DC 21 T BRU 22 T DG 23 T DG 24 T DT 25 T 19 1.20 1.46 214.2 -1.73 -0.37 20.4 80 17 14 9 11 9 2 0   20 1.91 4.35 213.4 -1.99 -0.55 22.9 83 20 10 13 7 2 6 0  DA 2 N DA 1 P DC 5 P DC 6 P DA 7 P DA 17 T DC 18 T DG 19 T DC 21 T BRU 22 T DG 23 T DG 24 T DT 25 T 21 1.19 1.36 222.5 -1.10 -0.31 17.0 84 19 14 16 11 7 3 1   22 1.54 3.55 221.5 -1.90 -0.53 22.8 84 20 15 15 12 4 3 0   23 1.62 2.83 234.1 -1.99 -0.48 24.1 85 17 11 11 8 3 3 0   24 1.21 1.45 242.4 -1.24 -0.37 18.9 86 20 19 20 19 7 3 1  CSX 8 M DA 9 T DA 10 T 25 1.36 1.50 249.5 -2.01 -0.58 24.1 85 25 20 18 15 2 4 0  DT 4 N DA 5 N DC 6 N DA 10 T 26 1.70 1.75 251.5 -1.83 -0.52 23.1 86 21 20 24 15 6 4 0  CSX 8 M 27 1.18 1.46 263.8 -1.70 -0.45 21.3 85 24 17 21 15 9 2 0  CSX 8 M 28 1.25 1.46 265.5 -1.88 -0.52 21.5 85 23 18 23 16 6 3 0  DT 4 N DA 5 N DC 6 N DA 10 T 29 0.75 2.39 300.6 -1.40 -0.36 18.7 87 26 16 24 15 7 4 1  CSX 8 M DA 9 T DA 10 T 30 0.77 2.27 309.6 -1.96 -0.49 22.8 86 26 18 28 11 6 5 0  CSX 8 M Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.