PDBsum entry 2vti Go to PDB code:  Tunnel analysis for: 2vti calculated with MOLE 2.0 PDB id 2vti Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.34 22.7 1.32 0.20 3.0 72 1 0 1 7 2 0 0   2 1.33 1.33 35.6 2.20 0.60 4.4 77 1 1 0 13 3 0 0  LZ3 1299 A 3 1.33 1.33 45.2 0.66 0.19 11.2 80 3 2 2 14 4 0 0  LZ3 1299 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.