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PDBsum entry 2vrs

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2vrs calculated with MOLE 2.0 PDB id
2vrs
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.47 38.3 -1.44 -0.33 17.9 86 5 2 4 0 4 0 0  
2 1.29 1.46 40.0 -2.15 -0.22 29.8 83 7 5 2 2 4 0 0  
3 1.28 1.47 40.8 -1.33 -0.31 16.9 87 5 2 4 2 4 0 0  
4 1.29 1.46 41.1 -1.31 -0.33 16.9 87 5 2 4 2 4 0 0  
5 1.28 1.48 55.7 -2.41 -0.45 32.1 87 8 9 3 3 4 0 0  
6 1.32 1.54 57.2 -2.49 -0.44 33.0 87 8 8 3 3 4 0 0  
7 1.28 1.46 60.1 -2.15 -0.33 30.6 88 8 8 3 5 4 0 0  
8 1.12 1.12 64.4 -2.53 -0.42 32.1 85 7 8 5 3 5 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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