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PDBsum entry 2vn9

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protein ligands metals Protein-protein interface(s) links
Transferase PDB id
2vn9

 

 

 

 

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Contents
Protein chain
301 a.a. *
Ligands
PO4 ×4
EPE
GVD ×2
Metals
_CL
Waters ×97
* Residue conservation analysis
PDB id:
2vn9
Name: Transferase
Title: Crystal structure of human calcium calmodulin dependent protein kinase ii delta isoform 1, camkd
Structure: Calcium/calmodulin-dependent protein kinase type ii delta chain. Chain: a, b. Fragment: kinase domain, residues 11-309. Synonym: cam-kinase ii delta chain, cam kinase ii subunit delta, camk-ii subunit delta, calcium calmodulin dependent protein kinase ii delta isoform 1. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008. Expression_system_variant: r3-prare2.
Resolution:
2.30Å     R-factor:   0.213     R-free:   0.248
Authors: A.K.Roos,P.Rellos,E.Salah,A.C.W.Pike,O.Fedorov,E.S.Pilka,F.Von Delft, C.H.Arrowsmith,J.Weigelt,A.Edwards,C.Bountra,S.Knapp
Key ref: P.Rellos et al. (2010). Structure of the CaMKIIdelta/calmodulin complex reveals the molecular mechanism of CaMKII kinase activation. Plos Biol, 8, e1000426. PubMed id: 20668654
Date:
31-Jan-08     Release date:   26-Feb-08    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q13557  (KCC2D_HUMAN) -  Calcium/calmodulin-dependent protein kinase type II subunit delta from Homo sapiens
Seq:
Struc:
499 a.a.
301 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.2.7.11.17  - calcium/calmodulin-dependent protein kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H+
2. L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H+
L-seryl-[protein]
+ ATP
= O-phospho-L-seryl-[protein]
+ ADP
+ H(+)
L-threonyl-[protein]
+ ATP
= O-phospho-L-threonyl-[protein]
+ ADP
+ H(+)
      Cofactor: Ca(2+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
Plos Biol 8:e1000426 (2010)
PubMed id: 20668654  
 
 
Structure of the CaMKIIdelta/calmodulin complex reveals the molecular mechanism of CaMKII kinase activation.
P.Rellos, A.C.Pike, F.H.Niesen, E.Salah, W.H.Lee, F.von Delft, S.Knapp.
 
  ABSTRACT  
 
No abstract given.

 

 

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