PDBsum entry 2vlj Go to PDB code:  Pore analysis for: 2vlj calculated with MOLE 2.0 PDB id 2vlj Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.12 2.32 31.4 -3.09 -0.81 30.1 86 3 3 4 0 0 0 0   2 1.21 1.39 44.7 -1.55 -0.72 12.4 87 3 4 6 2 1 0 0   3 1.73 1.84 48.5 -1.57 -0.61 13.2 84 3 2 6 2 1 3 0   4 1.91 4.87 78.6 -1.87 -0.51 17.0 86 3 3 7 1 1 1 0   5 1.21 1.37 93.6 -1.56 -0.60 13.2 87 3 6 10 5 1 0 0   6 2.69 3.26 109.2 -2.13 -0.54 24.3 82 7 5 7 2 2 1 0   7 1.23 1.35 115.0 -1.44 -0.60 12.8 87 4 5 12 4 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.