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PDBsum entry 2vk5

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Cleft analysis for: 2vk5 PDB id
2vk5
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2014.88 1.34 68.56 3 11.94 2 13.30 1 5 4 11 8 8 4 0  
2 1503.14 0.00 79.29 1 18.52 1 10.44 2 5 4 11 10 2 3 0  
3 1825.03 0.00 68.46 4 10.09 5 9.91 4 6 7 11 10 2 1 0 GOL 1[A] (6 atoms)
4 1445.34 0.00 72.57 2 10.94 3 9.43 6 7 4 7 5 8 5 0  
5 752.62 0.00 59.75 9 7.63 7 9.98 3 4 3 3 3 3 2 1  
6 764.02 0.00 63.89 8 10.67 4 8.66 7 3 1 7 4 2 4 0  
7 1031.48 0.00 64.69 6 7.35 8 6.92 8 5 7 6 5 3 3 0  
8 581.34 0.00 68.32 5 10.08 6 9.56 5 1 3 5 2 1 3 0  
9 437.06 0.00 64.08 7 6.71 9 5.95 10 4 6 2 1 0 1 0  
10 456.05 0.00 56.65 10 5.38 10 6.85 9 2 1 4 3 1 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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