spacer
spacer

PDBsum entry 2vh4

Go to PDB code: 
Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 2vh4 calculated with MOLE 2.0 PDB id
2vh4
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.42 2.48 32.4 -2.31 -0.67 24.2 82 6 2 3 1 1 0 0  
2 2.80 3.06 41.0 -2.30 -0.65 22.7 81 6 2 4 1 1 1 0  
3 1.41 1.41 160.5 -2.53 -0.54 23.7 84 3 5 4 1 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer