spacer
spacer

PDBsum entry 2vcq

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) links
Protein chain A    -    representing identical chains: B C D PDB id
2vcq
Protein chain A highlighted
(click to view)
 
Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
1 sheet
1 beta alpha beta unit
1 beta hairpin
1 psi loop
4 strands
12 helices
20 helix-helix interacs
11 beta turns
2 gamma turns
Catalytic residues
Y8
R14-W104-Y8
Variants
Phe151Ser
Ile91Val
Asp110Asn
Lys112Glu
Met128Thr
Arg173Ser
Val187Ile
  
Chain & (198 residues)

UniProt code: O60760 (HPGDS_HUMAN)   [Pfam]   [Ensembl gene]

structural classification (2 domains) :
Domain Links CATH no.   Class Architecture
1 3.40.30.10 = Alpha Beta 3-Layer(aba) Sandwich
2 1.20.1050.10 = Mainly Alpha Up-down Bundle

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
CSA annotation:   
    catalytic residue
Human variant:   
    variant residue
Residue contacts:   
    to ligand
PDB SITE records:   
 AC1  AC2  AC3  AC4  AC5
 AC6  AC7

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
spacer
spacer