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PDBsum entry 2vb1

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Cleft analysis for: 2vb1 PDB id
2vb1
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1221.33 2.72 61.80 3 10.24 1 9.32 1 1 3 11 6 4 0 0 EDO 302[A], NO3 404[A] (8 atoms)
2 449.72 0.00 49.30 9 7.95 2 7.08 2 2 1 0 2 0 1 2  
3 351.42 0.00 59.13 7 5.04 3 6.46 3 2 0 4 2 1 0 1 EDO 301[A] (4 atoms)
4 269.16 0.00 61.13 4 2.96 7 0.00 9 3 2 1 3 1 0 0 NO3 403[A] (4 atoms)
5 214.31 0.00 66.61 1 4.61 4 5.13 7 2 1 3 1 1 2 1 ACT 201[A] (4 atoms)
6 208.83 0.00 57.65 8 2.99 6 5.99 4 1 1 2 2 2 0 2  
7 138.38 0.00 59.90 5 1.82 10 5.51 5 1 1 1 1 2 0 0  
8 176.77 0.00 59.54 6 1.87 9 5.42 6 1 0 3 1 2 2 0  
9 170.86 0.00 64.62 2 4.45 5 0.00 10 2 1 3 0 1 1 0  
10 131.20 0.00 43.44 10 2.73 8 5.01 8 1 0 2 1 0 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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