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PDBsum entry 2v8x

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2v8x calculated with MOLE 2.0 PDB id
2v8x
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.48 1.56 18.8 -1.23 -0.34 23.6 82 5 3 0 2 2 0 0  
2 1.32 1.89 16.0 -1.08 0.11 13.3 68 3 1 2 2 4 0 0  MGQ 1218 A
3 1.48 1.71 17.5 1.58 1.06 1.1 54 0 0 0 5 5 0 0  
4 1.54 1.70 17.2 1.67 1.02 1.1 55 0 0 0 5 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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