PDBsum entry 2v8o Go to PDB code:  Tunnel analysis for: 2v8o calculated with MOLE 2.0 PDB id 2v8o Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.46 1.46 23.7 -1.35 -0.46 15.2 82 3 2 2 3 0 2 0   2 1.46 1.46 24.1 -1.98 -0.60 19.0 84 4 1 2 3 0 1 0   3 1.46 1.46 28.5 -2.02 -0.59 20.6 83 4 1 1 3 0 1 0   4 1.47 1.47 30.6 -1.59 -0.51 20.6 81 3 4 1 3 0 2 0   5 1.26 1.47 19.5 0.19 -0.04 9.4 79 2 0 0 4 1 0 0   6 1.26 1.58 20.0 0.29 0.04 11.1 81 2 1 0 5 1 0 0   7 1.25 1.52 31.4 -0.66 -0.07 13.3 76 3 3 1 5 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.