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PDBsum entry 2v7q

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Pore analysis for: 2v7q calculated with MOLE 2.0 PDB id
2v7q
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.51 1.60 28.3 -1.20 -0.48 17.4 80 3 3 1 5 0 1 0  
2 1.39 1.39 28.3 -1.39 -0.51 13.7 81 2 1 3 2 2 2 0  ATP 1511 B
3 1.35 1.65 40.3 -1.70 -0.36 23.5 76 5 5 1 4 2 0 0  
4 1.16 1.14 52.2 -0.74 -0.24 17.9 83 5 6 1 8 1 2 0  
5 1.89 2.32 58.0 -1.66 -0.33 20.2 82 6 6 6 7 1 0 0  
6 1.75 1.75 58.6 -1.88 -0.26 25.8 80 6 7 2 3 2 1 0  
7 1.72 2.77 60.1 -0.94 -0.13 17.3 77 5 7 2 8 3 1 0  
8 1.28 1.88 69.2 -0.72 -0.34 12.4 77 5 5 1 7 3 5 0  
9 1.10 1.13 71.9 0.28 0.29 13.1 81 5 3 3 10 3 0 0  
10 1.59 3.03 78.8 -0.72 -0.33 17.3 88 6 3 5 10 0 0 0  
11 1.55 1.72 78.8 -1.86 -0.29 26.1 79 8 6 3 3 2 1 0  
12 2.57 2.71 90.7 -1.79 -0.54 23.9 85 9 9 7 11 1 1 0  
13 1.27 1.30 94.5 -0.34 -0.24 11.7 82 6 7 2 15 1 7 0  
14 1.31 1.33 94.0 -1.01 -0.30 17.9 81 6 8 7 7 2 0 0  
15 1.64 1.86 96.7 -0.90 -0.36 15.6 87 9 7 5 13 0 3 0  
16 1.57 3.01 97.5 -0.30 -0.10 17.9 89 4 5 5 12 1 1 0  
17 1.67 1.69 101.5 -1.09 -0.38 18.7 85 11 10 3 12 1 4 0  
18 1.45 1.47 108.2 -1.26 -0.33 16.2 86 8 5 9 7 5 3 0  PO4 1475 E
19 1.62 1.89 123.5 -1.67 -0.39 23.7 82 14 11 7 14 3 1 0  
20 1.44 1.87 125.5 -1.33 -0.47 20.6 84 10 11 4 14 3 1 0  
21 1.33 1.70 130.3 -1.47 -0.48 23.1 82 12 14 2 12 4 2 0  
22 1.43 2.31 143.4 -0.62 -0.20 18.5 85 10 12 4 19 6 1 0  ADP 1475 F
23 1.39 1.68 148.5 -1.04 -0.28 22.1 81 12 14 4 14 6 1 0  
24 1.22 1.44 148.1 -0.95 -0.37 19.1 86 11 13 5 21 1 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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