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PDBsum entry 2v6e
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Pore analysis for: 2v6e calculated with MOLE 2.0
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PDB id
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2v6e
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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14 pores,
coloured by radius |
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11 pores,
coloured by radius
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11 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.05 |
3.19 |
27.7 |
-0.45 |
-0.09 |
15.0 |
72 |
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1 |
2 |
2 |
1 |
3 |
0 |
0 |
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DG 13 C DG 14 C DG 21 C DT 33 D DT 34 D DG 35 D
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2 |
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2.31 |
2.31 |
36.0 |
-0.56 |
-0.23 |
11.8 |
71 |
1 |
2 |
1 |
1 |
3 |
0 |
0 |
DG 13 C DG 14 C DT 20 C DG 21 C DT 33 D DT 34 D DG 35 D
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3 |
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1.20 |
2.81 |
51.4 |
-2.58 |
-0.73 |
30.6 |
84 |
6 |
5 |
3 |
1 |
1 |
0 |
0 |
DA 8 C DC 3 E
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4 |
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1.54 |
1.67 |
59.1 |
-0.38 |
-0.07 |
10.9 |
83 |
2 |
2 |
3 |
6 |
2 |
0 |
0 |
DG 13 E DG 14 E
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5 |
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2.63 |
2.63 |
68.0 |
-1.66 |
-0.60 |
18.7 |
86 |
5 |
6 |
5 |
3 |
1 |
1 |
0 |
DA 8 C DC 3 E DG 13 E DG 14 E DA 42 F DT 43 F
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6 |
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1.99 |
2.03 |
75.8 |
-1.58 |
-0.57 |
14.1 |
87 |
3 |
5 |
6 |
4 |
1 |
1 |
0 |
DG 2 C DC 3 C DG 4 C DG 13 C DG 14 C DA 42 D DT 43 D DC 3 E DG 4 E DC 5 E DG 13 E DG 14 E DA 42 F DT 43 F
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7 |
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2.00 |
2.00 |
92.4 |
-1.03 |
-0.53 |
11.2 |
80 |
3 |
4 |
3 |
2 |
2 |
2 |
0 |
DG 23 E DT 24 E DA 31 F DA 32 F DT 33 F DT 34 F
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8 |
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1.70 |
1.70 |
99.8 |
-0.78 |
-0.45 |
10.1 |
72 |
2 |
2 |
2 |
1 |
3 |
1 |
0 |
DA 18 E DT 19 E DT 20 E DG 21 E DG 23 E DT 24 E D A 31 F DA 32 F DT 33 F DT 34 F DG 35 F DC 36 F
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9 |
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2.11 |
2.34 |
103.5 |
-0.95 |
-0.01 |
12.4 |
73 |
6 |
4 |
3 |
5 |
7 |
3 |
1 |
DG 13 C DG 14 C DT 33 D DT 34 D
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10 |
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2.63 |
2.63 |
110.7 |
-1.38 |
-0.61 |
12.9 |
85 |
6 |
6 |
8 |
4 |
3 |
1 |
0 |
DC 3 C DG 4 C DC 5 C DG 6 C DT 7 C DA 8 C DG 13 C DG 14 C DA 42 D DT 43 D DC 3 E DG 4 E DC 5 E DG 6 E
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11 |
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1.43 |
2.68 |
120.0 |
-1.91 |
-0.58 |
20.0 |
85 |
7 |
11 |
9 |
6 |
2 |
1 |
0 |
DG 2 C DC 3 C DG 4 C DG 13 C DG 14 C DA 42 D DT 43 D DC 3 E DG 4 E DC 5 E
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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