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PDBsum entry 2v5y

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Protein chain A PDB id
2v5y
Protein chain A highlighted
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Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
8 sheets
14 beta hairpins
12 beta bulges
42 strands
2 helices
47 beta turns
7 gamma turns
4 disulphides
Active sites
AC1
AC2
AC3
AC4
AC5
AC6
AC7
AC8
AC9
Variants
Ser19Arg
Tyr253Cys
Ile479Met
Leu50Met
  
Chain (564 residues)

UniProt code: P28827 (PTPRM_HUMAN)   [Pfam]   [Ensembl gene]

structural classification (5 domains) :
Domain Links CATH no.   Class Architecture
1 2.60.120.200 = Mainly Beta Sandwich
2 2.60.40.10 = Mainly Beta Sandwich
3 2.60.40.10 = Mainly Beta Sandwich
4 2.60.40.10 = Mainly Beta Sandwich
5 2.60.40.10 = Mainly Beta Sandwich

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Disulphides:   
    disulphide bond
Human variant:   
    variant residue
Residue contacts:   
    to ligand     to metal
PDB SITE records:   
 AC1  AC2  AC3  AC4  AC5
 AC6  AC7  AC8  AC9

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


Domain 3
Topology diagram


Hera


Domain 4
Topology diagram


Hera


Domain 5
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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