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PDBsum entry 2v5y

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Cleft analysis for: 2v5y PDB id
2v5y
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 3685.92 1.79 64.00 3 11.61 1 14.97 1 12 5 18 13 7 11 1 NAG 1571[A] (4 atoms)
2 2062.55 0.00 59.15 6 7.87 6 11.07 3 2 4 17 7 5 7 0 NAG 1573[A] (4 atoms)
3 1428.05 0.00 60.95 5 8.40 5 10.07 5 5 4 7 4 5 2 0  
4 1014.61 0.00 54.72 9 6.66 9 11.05 4 0 4 5 2 2 3 0  
5 1009.55 0.00 64.47 2 8.66 4 12.26 2 1 2 7 2 5 3 1  
6 1134.42 0.00 61.05 4 9.25 3 7.78 7 2 4 5 5 3 5 2 NAG 1570[A] (4 atoms)
7 830.25 0.00 58.96 7 10.86 2 6.29 10 1 4 7 3 2 2 0 NAG 1572[A] (5 atoms)
8 683.44 0.00 50.55 10 6.62 10 8.16 6 2 2 5 2 0 8 0  
9 707.91 0.00 58.89 8 6.89 8 7.70 8 3 3 6 4 0 4 0  
10 577.12 0.00 68.38 1 7.15 7 6.94 9 3 2 4 5 2 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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