spacer
spacer

PDBsum entry 2v4i

Go to PDB code: 
Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 2v4i calculated with MOLE 2.0 PDB id
2v4i
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.44 3.20 117.2 -2.81 -0.65 36.8 85 15 20 2 5 0 1 1  
2 1.40 1.46 141.5 -1.13 -0.32 19.9 82 9 10 5 10 1 3 0  
3 1.76 2.08 155.5 -1.98 -0.46 27.6 83 15 13 4 9 1 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer