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PDBsum entry 2v1u

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Pore analysis for: 2v1u calculated with MOLE 2.0 PDB id
2v1u
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.62 31.1 1.51 0.60 4.8 84 2 1 3 10 1 0 0  DA 13 B DC 5 C DT 6 C
2 1.35 1.55 32.9 0.38 0.17 6.7 74 1 1 2 5 1 0 0  
3 1.35 1.57 40.3 0.11 0.06 6.3 80 1 1 3 6 1 0 0  
4 3.34 3.36 56.4 -3.01 -0.53 39.1 81 10 6 1 3 0 1 0  
5 2.63 2.85 61.2 -2.08 -0.43 23.9 82 7 2 4 3 1 1 0  DG 10 B DA 11 B DA 12 B DA 13 B DC 5 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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