PDBsum entry 2rvk

Pore analysis for: 2rvk calculated with

MOLE 2.0

PDB id

2rvk

Pores calculated on whole structure

Pores calculated excluding ligands

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8 pores, coloured by radius

8 pores, coloured by radius

8 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.26

1.25

42.2

2.37

0.70

1.9

78

1

0

2

15

2

1

0

2

1.32

1.79

45.2

-0.97

-0.11

11.5

81

1

3

6

4

4

2

0

3

1.22

1.36

45.7

-1.33

-0.12

12.1

80

2

3

6

3

5

1

0

4

1.35

1.79

47.4

-0.82

-0.04

10.2

84

2

2

7

6

4

1

0

5

1.24

1.70

49.3

2.02

0.61

3.0

76

2

1

2

15

3

1

0

6

1.79

2.85

79.3

-2.06

-0.43

15.5

87

4

2

8

2

3

1

0

7

1.36

1.79

89.0

0.36

0.32

9.3

79

3

1

5

7

3

2

0

8

1.19

1.65

104.3

0.39

0.33

9.1

75

4

2

5

9

4

2

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.