PDBsum entry 2rsd

Ligase

PDB id

2rsd

Loading ...

Contents

			Protein chain

					68 a.a.

			Metals

					_ZN ×2

PDB id:

2rsd

Links
- PDBe
- RCSB
- MMDB
- JenaLib
- Proteopedia
- CATH
- SCOP
- PDBSWS
- ProSAT

Name:

Ligase

Title:

Solution structure of the plant homeodomain (phd) of the e3 sumo ligase siz1 from rice

Structure:

E3 sumo-protein ligase siz1. Chain: a. Fragment: plant homeodomain, unp residues 107-172. Engineered: yes

Source:

Oryza sativa japonica group. Japanese rice. Organism_taxid: 39947. Gene: siz1, os05g0125000, loc_os05g03430, osjnbb0079l11.3. Expressed in: escherichia coli. Expression_system_taxid: 562.

NMR struc:

20 models

Authors:

H.Shindo,W.Tsuchiya,R.Suzuki,T.Yamazaki

Key ref:

H.Shindo et al. (2012). PHD finger of the SUMO ligase Siz/PIAS family in rice reveals specific binding for methylated histone H3 at lysine 4 and arginine 2. Febs Lett, 586, 1783-1789. PubMed id: 22626555

Date:

12-Jan-12

Release date:

15-Aug-12

PROCHECK

	Headers

	References

Protein chain

Q6L4L4 (SIZ1_ORYSJ) - E3 SUMO-protein ligase SIZ1 from Oryza sativa subsp. japonica

Seq: Struc:

Seq: Struc:					875 a.a. 68 a.a.*

Key:

PfamA domain

Secondary structure

CATH domain

* PDB and UniProt seqs differ at 2 residue positions (black crosses)



		Enzyme reactions

Enzyme class:

E.C.2.3.2.- - ?????

[IntEnz] [ExPASy] [KEGG] [BRENDA]

	Febs Lett 586:1783-1789 (2012)
PubMed id: 22626555

PHD finger of the SUMO ligase Siz/PIAS family in rice reveals specific binding for methylated histone H3 at lysine 4 and arginine 2.
H.Shindo, R.Suzuki, W.Tsuchiya, M.Taichi, Y.Nishiuchi, T.Yamazaki.

ABSTRACT

No abstract given.