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Ligand clusters for UniProt code Q75I93

Ligand clusters for Q75I93: Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1

5 ligand clusters
Cluster 1.
7 ligand types
23 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
18 ligands
Cluster 4.
1 ligand type
18 ligands
Cluster 5.
1 ligand type
18 ligands
Representative protein: 3ahvA  
 

Structures

PDB   Schematic diagram
3ahvA    
3ahtA    
3scnA    
3f5kA    
3f5jA    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: G2F × 1
2-Deoxy-2-Fluoro-Alpha-D-Glucopyranose
PDB code: 2rgm(A).


 
2. Ligand: GOL × 10
Glycerol
PDB codes: 2rgl(A), 2rgm(A), 3ahv(A), 3f4v(A), 3sco(A), 3scp(A), 3scr(A), 3scs(A).


 
3. Ligand: CTT × 4
Beta-D-Glucopyranosyl-(1->4)-Beta-D-Glucopyranosyl-(1- >4)-Beta-D-Glucopyranosyl-(1->4)-Beta-D-
Glucopyranose
PDB codes: 3f5j(A), 3sct(A), 3scv(A), 3scw(A).


 
4. Ligand: GLF × 3
1-Fluoro-Alpha-1-Deoxy-D-Glucose
PDB codes: 3sco(A), 3scq(A), 3scs(A).


 
5. Ligand: CE5 × 2
Cellopentaose
PDB codes: 3f5k(A), 3scu(A).


 
6. Ligand: G2F × 1
2-Deoxy-2-Fluoro-Alpha-D-Glucopyranose
PDB code: 3ahv(A).


 
7. Ligand: LB2 × 2
3-O-Beta-D-Glucopyranosyl-Beta-D-Glucopyranose
PDB codes: 3aht(A), 3f5l(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: CTT × 3
Beta-D-Glucopyranosyl-(1->4)-Beta-D-Glucopyranosyl-(1- >4)-Beta-D-Glucopyranosyl-(1->4)-Beta-D-
Glucopyranose
PDB codes: 3sct(A), 3scv(A), 3scw(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: MES × 18
2-(N-Morpholino)-Ethanesulfonic acid
PDB codes: 2rgl(A), 2rgm(A), 3aht(A), 3ahv(A), 3f4v(A), 3f5j(A), 3f5k(A), 3f5l(A), 3scn(A), 3sco(A), 3scp(A), 3scq(A), 3scr(A), 3scs(A), 3sct(A), 3scu(A), 3scv(A), 3scw(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 18
Sulfate ion
PDB codes: 2rgl(A), 2rgm(A), 3aht(A), 3ahv(A), 3f4v(A), 3f5j(A), 3f5k(A), 3f5l(A), 3scn(A), 3sco(A), 3scp(A), 3scq(A), 3scr(A), 3scs(A), 3sct(A), 3scu(A), 3scv(A), 3scw(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 18
PDB codes: 2rgl(A), 2rgm(A), 3aht(A), 3ahv(A), 3f4v(A), 3f5j(A), 3f5k(A), 3f5l(A), 3scn(A), 3sco(A), 3scp(A), 3scq(A), 3scr(A), 3scs(A), 3sct(A), 3scu(A), 3scv(A), 3scw(A).

 

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