PDBsum entry 2rf2 Go to PDB code:  Tunnel analysis for: 2rf2 calculated with MOLE 2.0 PDB id 2rf2 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.47 37.5 -3.04 -0.71 28.3 86 3 1 1 0 0 0 0   2 1.21 1.48 17.0 2.27 0.93 4.2 68 1 1 0 8 1 0 0   3 1.42 1.69 18.6 1.40 0.21 6.1 84 1 1 2 7 1 0 0   4 1.31 2.20 21.1 2.10 0.46 1.4 81 0 0 2 7 2 0 0   5 1.20 1.30 17.7 1.10 0.42 10.9 72 2 0 0 7 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.