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PDBsum entry 2ram
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Pore analysis for: 2ram calculated with  MOLE 2.0
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PDB id
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2ram
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.94 |
3.00 |
26.5 |
-0.43 |
-0.02 |
15.3 |
52 |
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1 |
0 |
0 |
0 |
1 |
0 |
2 |
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DT 5 C DA 10 C DT 11 C 5IU 12 C 5IU 13 C DC 14 C
DC 15 C DA 9 D DA 10 D DT 11 D 5IU 12 D 5IU 13 D
DC 14 D
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2 |
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1.23 |
1.22 |
28.1 |
-2.06 |
-0.39 |
20.3 |
81 |
3 |
2 |
2 |
2 |
1 |
0 |
0 |
DG 6 C DG 7 C DC 15 C DA 10 D DT 11 D
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3 |
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2.70 |
2.70 |
49.1 |
-2.49 |
-0.62 |
28.4 |
85 |
7 |
5 |
4 |
2 |
0 |
0 |
0 |
DG 6 C DG 7 C DA 8 C DA 9 C DC 19 C DG 6 D DG 7 D
DA 8 D
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4 |
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2.82 |
2.83 |
56.5 |
-2.03 |
-0.61 |
25.9 |
76 |
4 |
4 |
2 |
0 |
1 |
0 |
2 |
DTV 501 A DT 11 C 5IU 12 C 5IU 13 C DC 14 C DC 15
C DA 9 D DA 10 D DT 11 D 5IU 12 D 5IU 13 D DC 14
D DC 15 D
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5 |
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2.51 |
2.51 |
79.9 |
-1.68 |
-0.78 |
18.4 |
85 |
4 |
4 |
3 |
1 |
0 |
0 |
0 |
DTV 501 A DG 6 C DG 7 C DA 8 C DA 9 C DA 10 C DT
11 C DC 15 D DA 16 D DG 17 D DC 18 D DC 19 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program