PDBsum entry 2r8h Go to PDB code:  Tunnel analysis for: 2r8h calculated with MOLE 2.0 PDB id 2r8h Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.15 22.8 -0.23 -0.55 3.8 94 1 0 1 3 0 0 0  DGT 7000 A DC 513 P DA 603 T DC 604 T P 605 T 2 1.15 1.15 24.4 -1.11 -0.52 19.2 87 3 3 0 3 0 0 0  DGT 7000 A CA 8001 A CA 8002 A CA 8003 A DC 513 P DC 604 T P 605 T 3 1.49 1.49 24.6 2.23 0.95 9.4 89 2 0 0 5 0 0 0  DT 512 P DC 513 P DC 604 T P 605 T DG 606 T DA 607 T 4 1.16 1.16 26.6 0.32 0.07 8.2 87 1 0 0 4 1 0 0  DGT 7000 A DC 604 T P 605 T DG 606 T 5 1.49 1.50 31.6 -0.35 0.19 22.3 95 3 0 2 3 0 0 0  DG 505 P DG 509 P DA 510 P DT 511 P DA 607 T DA 608 T DT 609 T DC 610 T 6 1.50 1.66 32.9 0.82 0.39 12.7 93 3 0 0 5 0 0 0  DC 604 T P 605 T DG 606 T DA 607 T 7 1.17 1.17 35.1 -1.14 -0.08 18.2 89 4 1 2 5 1 0 0  DGT 7000 A DC 604 T P 605 T DG 606 T 8 1.16 1.16 43.8 -1.02 -0.36 12.9 81 4 1 1 4 3 0 0  DGT 7000 A DT 512 P DC 513 P DC 604 T P 605 T DG 606 T DA 607 T DA 608 T DT 609 T DC 610 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.