PDBsum entry 2r0v

Tunnel analysis for: 2r0v calculated with

MOLE 2.0

PDB id

2r0v

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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without HETATM:

10 tunnels, coloured by tunnel radius

10 tunnels, coloured by tunnel radius

10 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.55

1.55

25.8

-0.35

-0.02

11.5

79

2

2

1

4

2

1

1

ALY 25 B

2

1.58

1.59

29.4

-0.99

-0.19

17.4

81

4

2

3

3

2

1

1

ALY 25 B

3

1.58

1.58

32.9

-1.06

-0.17

13.3

80

2

3

4

4

2

2

1

ALY 25 B

4

1.62

1.62

33.4

-1.00

0.02

9.2

79

2

2

6

3

3

2

1

ALY 25 B

5

2.35

2.35

18.1

-0.35

-0.14

13.5

78

1

3

5

3

1

0

0

6

2.35

2.36

20.0

-0.80

-0.22

13.5

77

2

2

5

3

1

0

0

7

2.28

3.27

20.6

-0.30

0.19

8.2

72

1

1

4

4

3

1

0

8

1.92

1.92

20.9

-0.47

-0.12

9.5

81

2

2

4

5

1

0

0

SO4 343 A

9

1.87

2.50

23.3

-0.08

0.24

6.0

85

1

0

4

4

2

0

0

SO4 343 A

10

1.87

2.50

23.3

-0.03

0.18

6.3

89

1

0

4

3

2

0

0

SO4 343 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.