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PDBsum entry 2r09

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Signaling protein PDB id
2r09
Contents
Protein chains
343 a.a.
Ligands
SO4 ×7
4IP ×2
PGE
PE5
Waters ×807

References listed in PDB file
Key reference
Title Structural basis and mechanism of autoregulation in 3-Phosphoinositide-Dependent grp1 family arf gtpase exchange factors.
Authors J.P.Dinitto, A.Delprato, M.T.Gabe lee, T.C.Cronin, S.Huang, A.Guilherme, M.P.Czech, D.G.Lambright.
Ref. Mol Cell, 2007, 28, 569-583. [DOI no: 10.1016/j.molcel.2007.09.017]
PubMed id 18042453
Abstract
Arf GTPases regulate membrane trafficking and actin dynamics. Grp1, ARNO, and Cytohesin-1 comprise a family of phosphoinositide-dependent Arf GTPase exchange factors with a Sec7-pleckstrin homology (PH) domain tandem. Here, we report that the exchange activity of the Sec7 domain is potently autoinhibited by conserved elements proximal to the PH domain. The crystal structure of the Grp1 Sec7-PH tandem reveals a pseudosubstrate mechanism of autoinhibition in which the linker region between domains and a C-terminal amphipathic helix physically block the docking sites for the switch regions of Arf GTPases. Mutations within either element result in partial or complete activation. Critical determinants of autoinhibition also contribute to insulin-stimulated plasma membrane recruitment. Autoinhibition can be largely reversed by binding of active Arf6 to Grp1 and by phosphorylation of tandem PKC sites in Cytohesin-1. These observations suggest that Grp1 family GEFs are autoregulated by mechanisms that depend on plasma membrane recruitment for activation.
Figure 3.
Figure 3. Pseudosubstrate Autoinhibition by the Sec7-PH Linker and C-Terminal Helix
(A) Intramolecular interactions at the interface between the linker and Sec7 domain.
(B) Intramolecular interactions at the interface between the C-terminal helix and Sec7 domain.
(C and D) Comparison of the linker and C-terminal helix of Grp1 with the switch I and II regions of Arf1-GDP from the complex with the E156K mutant of the ARNO Sec7 domain (PDB ID code 1R8S) after superposition of Cα atoms.
Figure 7.
Figure 7. Model for Autoregulation of Grp1 Family GEFs
After PtdIns(3,4,5)P[3]-dependent plasma membrane recruitment of Grp1 family GEFs, lateral association with Arf6-GTP simultaneously enhances membrane partitioning and shifts the equilibrium toward the catalytically competent conformation. Other mechanisms, including phosphorylation of PKC sites in the polybasic motif of Cytohesin-1, may be required for full activation.
The above figures are reprinted from an Open Access publication published by Cell Press: Mol Cell (2007, 28, 569-583) copyright 2007.
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