PDBsum entry 2qyh Go to PDB code:  Pore analysis for: 2qyh calculated with MOLE 2.0 PDB id 2qyh Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.48 3.31 25.1 0.09 0.30 12.2 68 4 1 0 3 2 2 0  MSE 49 A MSE 104 A MSE 109 A MSE 123 A GOL 260 A GOL 261 A 2 1.29 2.05 26.5 0.95 0.32 7.6 75 2 3 1 5 3 0 0  MSE 190 D MSE 191 D 3 1.30 1.29 27.0 -0.28 -0.48 7.0 89 0 3 2 3 0 1 0  MSE 224 D GOL 259 D 4 2.51 3.37 30.6 -0.48 0.08 16.0 71 4 3 1 3 2 2 0  MSE 49 C MSE 104 C MSE 109 C MSE 123 C GOL 260 C GOL 261 C 5 1.50 1.50 32.2 0.43 0.12 10.7 78 2 3 1 6 2 1 0  MSE 49 C MSE 104 C MSE 109 C MSE 123 C GOL 260 C 6 1.45 1.45 33.1 0.73 0.20 9.2 76 2 1 0 6 2 1 0  MSE 49 A MSE 104 A MSE 109 A MSE 123 A GOL 260 A 7 1.69 1.85 38.4 -1.64 -0.62 19.1 83 5 4 4 3 0 1 0  GOL 260 A 8 2.26 3.03 61.5 -1.86 -0.38 28.8 73 8 8 2 3 3 2 0  GOL 261 A MSE 49 D MSE 104 D MSE 109 D MSE 123 D GOL 260 D GOL 261 D GOL 262 D GOL 263 D 9 1.66 1.87 71.9 -0.61 -0.22 13.2 77 6 7 5 6 4 3 0  MSE 49 A MSE 104 A MSE 109 A MSE 123 A GOL 260 A GOL 261 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.