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PDBsum entry 2qwd

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Cleft analysis for: 2qwd PDB id
2qwd
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1630.97 0.97 77.68 1 10.25 4 7.90 9 8 6 14 7 3 5 0 4AM 800[A] (20 atoms)
2 1689.61 0.00 61.59 7 6.05 9 11.82 1 8 7 7 1 6 2 1 NAG 476A[A] (8 atoms)
3 699.47 0.00 58.05 9 11.64 1 8.48 4 3 0 2 3 3 1 0 NAG 478A[A] (4 atoms)
4 900.28 0.00 62.42 4 7.74 7 8.77 3 2 4 4 3 2 1 5  
5 779.20 0.00 56.75 10 7.83 6 8.44 6 3 4 3 3 1 2 0  
6 561.94 0.00 61.70 6 10.69 2 8.82 2 3 0 6 0 1 2 0  
7 399.09 0.00 58.79 8 7.29 8 8.18 7 2 1 1 0 2 2 0  
8 544.22 0.00 62.72 3 10.52 3 8.45 5 3 1 4 1 1 3 0  
9 619.31 0.00 62.07 5 4.12 10 6.55 10 2 1 5 6 2 2 0  
10 492.75 0.00 68.71 2 8.88 5 8.01 8 3 1 4 5 3 3 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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