PDBsum entry 2qs3 Go to PDB code:  Tunnel analysis for: 2qs3 calculated with MOLE 2.0 PDB id 2qs3 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.38 1.38 17.1 -1.66 -0.45 19.4 75 4 2 0 1 1 2 0   2 1.50 1.55 21.5 -1.01 -0.37 19.4 84 2 1 2 4 0 1 0   3 1.48 1.55 22.4 -0.93 -0.31 18.5 80 3 1 1 4 1 1 0   4 1.42 1.54 29.9 -1.50 -0.31 28.2 84 5 4 0 5 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.