PDBsum entry 2qqo Go to PDB code:  Pore analysis for: 2qqo calculated with MOLE 2.0 PDB id 2qqo Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.46 1.88 26.6 0.02 -0.15 8.0 82 2 2 2 5 0 2 0  EDO 6 B 2 1.20 1.50 27.0 -1.26 -0.27 18.9 79 4 2 2 3 2 0 0   3 2.08 4.50 37.4 -1.03 -0.49 15.5 69 2 2 0 1 2 0 0   4 1.44 1.93 39.2 -0.61 -0.19 11.1 79 5 1 3 7 0 2 0   5 2.08 4.47 47.1 -1.59 -0.47 18.4 78 3 2 2 1 2 0 0  EDO 5 B 6 1.44 1.90 51.9 -0.83 -0.07 19.2 82 6 3 4 7 2 1 0  EDO 5 B EDO 6 B 7 1.47 1.88 52.6 -0.58 -0.16 12.9 82 5 2 5 6 1 2 0  EDO 5 B EDO 6 B 8 2.78 2.88 54.8 -0.99 -0.26 17.5 76 9 4 3 2 3 0 2  EDO 5 B 9 1.20 1.55 55.6 -1.66 -0.39 23.3 77 6 2 2 4 2 1 0   10 1.82 2.01 69.0 -0.85 -0.22 15.3 79 6 1 2 6 0 2 2  EDO 2 A 11 1.48 1.90 72.9 -1.29 -0.30 20.6 81 7 3 2 8 1 2 0   12 1.91 2.02 116.0 -1.45 -0.27 24.4 82 10 4 1 7 0 2 2  EDO 2 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.