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PDBsum entry 2qpe

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2qpe calculated with MOLE 2.0 PDB id
2qpe
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.41 44.8 -0.17 0.43 11.6 76 4 0 3 10 6 0 0  801 HAS A
2 1.47 52.3 0.46 0.55 10.1 74 4 0 2 16 7 0 0  801 HAS A
3 1.46 56.0 0.05 0.25 12.6 80 7 1 4 14 6 0 0  801 HAS A
4 1.61 7.6 1.03 0.04 5.5 88 0 1 0 5 0 1 0  
5 1.94 5.8 3.06 1.10 0.4 71 0 0 0 5 1 0 0  
6 1.68 7.3 -0.51 0.06 2.1 66 0 0 0 1 1 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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