spacer
spacer

PDBsum entry 2qo8

Go to PDB code: 
Top Page protein ligands metals clefts links
Cleft analysis for: 2qo8 PDB id
2qo8
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1822.92 1.64 63.65 4 11.84 2 11.04 1 7 4 5 2 4 7 0  
2 1110.80 0.00 71.47 2 9.56 4 8.90 2 5 3 6 10 4 2 0 3CC 800[A], GOL 802[A] (25 atoms)
3 912.09 0.00 55.78 10 6.55 9 8.20 5 3 2 2 5 1 4 0  
4 936.98 0.00 63.24 5 7.45 7 6.32 10 5 3 7 3 2 7 0  
5 654.75 0.00 57.54 9 4.96 10 8.22 4 6 1 1 3 4 1 0  
6 450.56 0.00 61.23 8 8.11 6 6.79 9 2 2 1 3 2 2 0  
7 495.28 0.00 62.76 7 6.68 8 8.81 3 2 2 3 5 1 2 0  
8 377.16 0.00 71.83 1 8.69 5 7.66 7 4 1 2 2 0 4 0  
9 354.80 0.00 63.10 6 9.76 3 7.52 8 1 2 5 1 2 0 0  
10 416.81 0.00 65.02 3 13.03 1 7.90 6 5 1 2 0 3 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer